dc.contributor.author | Mossa, A. | |
dc.contributor.author | Manosas, M. | |
dc.contributor.author | Forns, N. | |
dc.contributor.author | Huguet Casades, Josep Maria | |
dc.contributor.author | Ritort, F. | |
dc.date.accessioned | 2024-03-18T15:03:36Z | |
dc.date.available | 2024-03-18T15:03:36Z | |
dc.date.issued | 2009 | |
dc.identifier.citation | Mossa, A.; Manosas, M.; Forns, N. [et al.]. Dynamic force spectroscopy of DNA hairpins: I. Force kinetics and free energy landscapes. Journal of Statistical Mechanics: Theory and Experiment, 2009, 2009, P02060. Disponible en: <https://iopscience.iop.org/article/10.1088/1742-5468/2009/02/P02060/pdf>. Fecha de acceso: 18 mar. 2024. DOI: 10.1088/1742-5468/2009/02/P02060 | ca |
dc.identifier.issn | 1742-5468 | ca |
dc.identifier.uri | http://hdl.handle.net/20.500.12328/4169 | |
dc.description.abstract | We investigate the thermodynamics and kinetics of DNA hairpins that fold/unfold under the action of applied mechanical force. We introduce the concept of the molecular free energy landscape and derive simplified expressions for the force dependent Kramers–Bell rates. To test the theory we have designed a specific DNA hairpin sequence that shows two-state cooperative folding under mechanical tension and carried out pulling experiments using optical tweezers. We show how we can determine the parameters that characterize the molecular free energy landscape of such sequences from rupture force kinetic studies. Finally we combine such kinetic studies with experimental investigations of the Crooks fluctuation relation to derive the free energy of formation of the hairpin at zero force. | ca |
dc.format.extent | Desconocido | ca |
dc.language.iso | eng | ca |
dc.publisher | IOP Publishing | ca |
dc.relation.ispartof | Journal of Statistical Mechanics: Theory and Experiment | ca |
dc.relation.ispartofseries | 2009 | |
dc.rights | © IOP Publishing | ca |
dc.subject.other | DNA | ca |
dc.subject.other | ADN | ca |
dc.title | Dynamic force spectroscopy of DNA hairpins: I. Force kinetics and free energy landscapes | ca |
dc.type | info:eu-repo/semantics/article | ca |
dc.description.version | info:eu-repo/semantics/publishedVersion | ca |
dc.rights.accessLevel | info:eu-repo/semantics/openAccess | |
dc.embargo.terms | cap | ca |
dc.subject.udc | 57 | ca |
dc.identifier.doi | https://dx.doi.org/10.1088/1742-5468/2009/02/P02060 | ca |